Detailed information of matrix profile MA0132.3

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Profile summary
Name: PDX1
Matrix ID: MA0132.3
Class: Homeo domain factors
Family: HOX
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: P52945  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 292 4839 7130 0 0 7130 ]
C [ 2469 2291 45 0 0 0 ]
G [ 0 185 0 0 0 0 ]
T [ 4661 78 0 7130 7130 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0132.1 MA0132 1 Pdx1 Mus musculus
HOX Homeo domain factors
MA0132.2 MA0132 2 PDX1 Homo sapiens
HOX Homeo domain factors
MA0132.3 MA0132 3 PDX1 Homo sapiens
HOX Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: