Detailed information of matrix profile MA0205.3

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Profile summary
Name: Trl
Matrix ID: MA0205.3
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: ChIP-seq
Validation: 22099633
Uniprot ID: Q08605  
Source: 30413482
Comment: Class and TF information inffered based on sequence similarity search using DELTA-BLAST within Nr. database and limiting the search to H. sapiens.

Sequence logo

Frequency matrix

         
A [ 549 413 50 28 27 50 178 154 252 ]
C [ 3800 495 6638 45 6783 44 6535 44 1902 ]
G [ 621 845 29 182 38 21 54 47 597 ]
T [ 1888 5105 141 6603 10 6743 91 6613 4107 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0205.1 MA0205 1 Trl Drosophila melanogaster
C2H2 zinc finger factors
MA0205.2 MA0205 2 Trl Drosophila melanogaster
C2H2 zinc finger factors
MA0205.3 MA0205 3 Trl Drosophila melanogaster
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     

-log(P-value) = 1512.86

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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