Detailed information of matrix profile MA0205.3

  1. Home
  2. Matrix > MA0205.3

Profile summary
Name: Trl
Matrix ID: MA0205.3
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Insects
Species: Drosophila melanogaster
Data Type: ChIP-seq
Validation: 22099633
Uniprot ID: Q08605  
Source: 30413482
Comment: Class and TF information inffered based on sequence similarity search using DELTA-BLAST within Nr. database and limiting the search to H. sapiens.

Sequence logo

Frequency matrix

         
A [ 4107 6613 91 6743 10 6603 141 5105 1888 ]
C [ 597 47 54 21 38 182 29 845 621 ]
G [ 1902 44 6535 44 6783 45 6638 495 3800 ]
T [ 252 154 178 50 27 28 50 413 549 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0205.1 MA0205 1 Trl Drosophila melanogaster
C2H2 zinc finger factors
MA0205.2 MA0205 2 Trl Drosophila melanogaster
C2H2 zinc finger factors
MA0205.3 MA0205 3 Trl Drosophila melanogaster
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     

-log(P-value) = 1512.86

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: