Detailed information of matrix profile MA0498.3

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Profile summary
Name: MEIS1
Matrix ID: MA0498.3
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 9405651
Uniprot ID: O00470  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 8690 0 77159 0 77159 ]
C [ 5575 1249 2903 77159 0 ]
G [ 3174 77159 672 0 9263 ]
T [ 77159 0 0 1155 3861 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0498.1 MA0498 1 Meis1 Mus musculus
TALE-type homeo domain factors Homeo domain factors
MA0498.2 MA0498 2 MEIS1 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
MA0498.3 MA0498 3 MEIS1 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: