Detailed information of matrix profile MA0505.2

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Profile summary
Name: Nr5A2
Matrix ID: MA0505.2
Class: Nuclear receptors with C4 zinc fingers
Family: FTZF1related(NR5A)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 12853459
Uniprot ID: P45448  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 14973 6332 2586 1125 322 29653 29125 343 237 2733 483 21101 5754 ]
C [ 4340 4191 5292 2402 29010 285 359 166 124 6736 27158 2303 7796 ]
G [ 5963 14671 8958 645 870 338 694 29734 29854 1185 869 3118 9076 ]
T [ 5266 5348 13706 26370 340 266 364 299 327 19888 2032 4020 7916 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0505.1 MA0505 1 Nr5a2 Mus musculus
FTZF1related(NR5A) Nuclear receptors with C4 zinc fingers
MA0505.2 MA0505 2 Nr5A2 Mus musculus
FTZF1related(NR5A) Nuclear receptors with C4 zinc fingers
MA0505.3 MA0505 3 Nr5A2 Mus musculus
FTZF1related(NR5A) Nuclear receptors with C4 zinc fingers
     

-log(P-value) = 3745.48

TFFM details

TFFM ID: TFFM0731.1

ChIP-seq Centrality
-log(P-value): 10870.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0731.1

ChIP-seq Centrality
-log(P-value): 10705.4

TFFM detailed summary logos

Description:

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Consensus:

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GC Content: