Detailed information of matrix profile MA0548.3

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Profile summary
Name: AGL15
Matrix ID: MA0548.3
Class: MADS box factors
Family: Type II
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 12743119
Uniprot ID: Q38847  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 48 16 84 0 0 200 88 162 7 89 138 125 0 325 543 475 ]
C [ 33 5 8 596 435 80 85 0 8 45 42 1 0 50 13 7 ]
G [ 5 3 21 0 0 50 53 4 0 31 168 473 585 28 5 29 ]
T [ 513 575 486 3 164 269 373 433 584 434 251 0 14 196 38 88 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0548.1 MA0548 1 AGL15 Arabidopsis thaliana
MIKC MADS box factors
MA0548.2 MA0548 2 AGL15 Arabidopsis thaliana
MIKC MADS box factors
MA0548.3 MA0548 3 AGL15 Arabidopsis thaliana
Type II MADS box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: