Detailed information of matrix profile MA0554.2

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Profile summary
Name: SOC1
Matrix ID: MA0554.2
Class: MADS box factors
Family: Type II
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 8774892
Uniprot ID: O64645  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 65 62 117 20 0 459 137 130 22 98 90 181 17 ]
C [ 27 0 47 855 617 37 78 6 8 24 71 10 23 ]
G [ 34 51 89 13 9 56 0 0 0 0 86 683 665 ]
T [ 762 775 635 0 262 336 673 752 858 766 641 14 183 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0554.1 MA0554 1 SOC1 Arabidopsis thaliana
MIKC MADS box factors
MA0554.2 MA0554 2 SOC1 Arabidopsis thaliana
Type II MADS box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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