Detailed information of matrix profile MA0693.3

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Profile summary
Name: Vdr
Matrix ID: MA0693.3
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 8065900
Uniprot ID: P48281  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 10760 11740 750 2057 35628 35489 1110 813 2150 12003 9952 ]
C [ 9017 9421 826 406 574 1555 36028 1137 25359 7467 8420 ]
G [ 7590 8330 661 34477 655 520 599 644 4678 7552 11090 ]
T [ 11175 9051 36305 1602 1685 978 805 35948 6355 11520 9080 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0693.1 MA0693 1 Vdr Mus musculus
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
MA0693.2 MA0693 2 VDR Homo sapiens
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
MA0693.3 MA0693 3 Vdr Mus musculus
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
MA0693.4 MA0693 4 Vdr Mus musculus
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM0769.1

ChIP-seq Centrality
-log(P-value): 1713.02

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0769.1

ChIP-seq Centrality
-log(P-value): 1453.52

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: