Detailed information of matrix profile MA0782.3

  1. Home
  2. Matrix > MA0782.3

Profile summary
Name: PKNOX1
Matrix ID: MA0782.3
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 23602564
Uniprot ID: P55347  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 5222 1654 36759 2325 1140 555 36374 651 33982 2745 ]
C [ 1625 1160 678 4123 878 1004 410 37846 944 4759 ]
G [ 3322 36106 1330 26182 1027 37713 2459 580 2408 27367 ]
T [ 29794 1043 1196 7333 36918 691 720 886 2629 5092 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0782.1 MA0782 1 PKNOX1 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
MA0782.2 MA0782 2 PKNOX1 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
MA0782.3 MA0782 3 PKNOX1 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
     

-log(P-value) = 5995.16

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: