Detailed information of matrix profile MA0784.3

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Profile summary
Name: POU1F1
Matrix ID: MA0784.3
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation: 2350782
Uniprot ID: P28069  
Source: 30250250
Comment:

Sequence logo

Frequency matrix

         
A [ 3278 1804 59 4127 17 3 16 2563 4127 4127 31 262 3907 504 ]
C [ 384 57 5 0 5 1 3708 0 2 1 28 192 220 372 ]
G [ 702 165 5 3 9 4127 67 0 13 0 7 1846 126 3623 ]
T [ 849 2323 4127 3 4127 54 419 1564 91 0 4127 2281 106 131 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0784.1 MA0784 1 POU1F1 Homo sapiens
POU domain factors Homeo domain factors
MA0784.2 MA0784 2 POU1F1 Homo sapiens
POU domain factors Homeo domain factors
MA0784.3 MA0784 3 POU1F1 Homo sapiens
POU domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: