Detailed information of matrix profile MA0930.2

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Profile summary
Name: ABF3
Matrix ID: MA0930.2
Class: Basic leucine zipper factors (bZIP)
Family: Group A
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 11005831 11005831
Uniprot ID: Q9M7Q3  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 2762 2424 89 5508 31 7551 76 39 1420 1948 ]
C [ 1589 1779 60 1935 7845 381 8414 36 908 1502 ]
G [ 1700 1283 7781 368 296 321 51 8374 606 3728 ]
T [ 2541 3106 662 781 420 339 51 143 5658 1414 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0930.1 MA0930 1 ABF3 Arabidopsis thaliana
Group A Basic leucine zipper factors (bZIP)
MA0930.2 MA0930 2 ABF3 Arabidopsis thaliana
Group A Basic leucine zipper factors (bZIP)
MA0930.3 MA0930 3 ABF3 Arabidopsis thaliana
Group A Basic leucine zipper factors (bZIP)
     

-log(P-value) = 163.844

TFFM details

TFFM ID: TFFM0809.1

ChIP-seq Centrality
-log(P-value): 2584.47

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0809.1

ChIP-seq Centrality
-log(P-value): 2499.67

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: