Detailed information of matrix profile MA1878.2

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Profile summary
Name: Hes-c
Matrix ID: MA1878.2
Class: Basic helix-loop-helix factors (bHLH)
Family: Hairy-related factors
Collection: CORE
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation: 26684323
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 120 165 45 245 23 42 35 26 ]
C [ 183 59 870 18 844 15 107 20 ]
G [ 560 629 34 697 24 924 24 920 ]
T [ 137 147 51 40 109 19 834 34 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1878.1 MA1878 1 Hes-c Ciona intestinalis
Hairy-related factors Basic helix-loop-helix factors (bHLH)
MA1878.2 MA1878 2 Hes-c Ciona intestinalis
Hairy-related factors Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: