| Name: | NFkb |
| Matrix ID: | MA1902.1 |
| Class: | Rel homology region (RHR) factors |
| Family: | NF-kappaB-related factors |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 32647255 |
| Uniprot ID: | Q4H348 |
| Source: | 31267468 |
| Comment: |
| A [ | 258 | 260 | 260 | 278 | 219 | 77 | 38 | 39 | 205 | 687 | 207 | 71 | 68 | 49 | 14 | 90 | 192 | 233 | 241 | 233 | 231 | 227 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 250 | 242 | 243 | 245 | 187 | 71 | 29 | 11 | 49 | 67 | 56 | 137 | 758 | 924 | 964 | 686 | 324 | 242 | 245 | 246 | 248 | 253 | ] |
| G [ | 257 | 255 | 247 | 243 | 428 | 788 | 843 | 877 | 658 | 99 | 56 | 51 | 19 | 8 | 10 | 100 | 215 | 243 | 242 | 247 | 253 | 258 | ] |
| T [ | 236 | 243 | 250 | 234 | 166 | 65 | 90 | 73 | 89 | 147 | 681 | 741 | 155 | 20 | 12 | 123 | 268 | 283 | 271 | 274 | 267 | 263 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1902.1 | MA1902 | 1 | NFkb |
Ciona intestinalis
|
NF-kappaB-related factors | Rel homology region (RHR) factors |  |
| MA1902.2 | MA1902 | 2 | NFkb |
Ciona intestinalis
|
NF-kappaB-related factors | Rel homology region (RHR) factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: