Detailed information of matrix profile MA1902.2

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Profile summary
Name: NFkb
Matrix ID: MA1902.2
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Collection: CORE
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation: 32647255
Uniprot ID: Q4H348  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 123 12 20 155 741 681 147 89 73 90 65 ]
C [ 100 10 8 19 51 56 99 658 877 843 788 ]
G [ 686 964 924 758 137 56 67 49 11 29 71 ]
T [ 90 14 49 68 71 207 687 205 39 38 77 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1902.1 MA1902 1 NFkb Ciona intestinalis
NF-kappaB-related factors Rel homology region (RHR) factors
MA1902.2 MA1902 2 NFkb Ciona intestinalis
NF-kappaB-related factors Rel homology region (RHR) factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: