Detailed information of matrix profile MA1902.2

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Profile summary
Name: NFkb
Matrix ID: MA1902.2
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Collection: CORE
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation: 32647255
Uniprot ID: Q4H348  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 77 38 39 205 687 207 71 68 49 14 90 ]
C [ 71 29 11 49 67 56 137 758 924 964 686 ]
G [ 788 843 877 658 99 56 51 19 8 10 100 ]
T [ 65 90 73 89 147 681 741 155 20 12 123 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1902.1 MA1902 1 NFkb Ciona intestinalis
NF-kappaB-related factors Rel homology region (RHR) factors
MA1902.2 MA1902 2 NFkb Ciona intestinalis
NF-kappaB-related factors Rel homology region (RHR) factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: