| Name: | Nk-1 |
| Matrix ID: | MA1903.1 |
| Class: | Homeo domain factors |
| Family: | NK |
| Collection: | CORE |
| Taxon: | Urochordates |
| Species: | Ciona intestinalis |
| Data Type: | SELEX |
| Validation: | 26684323 |
| Uniprot ID: | |
| Source: | 31267468 |
| Comment: | No UniProt ID found. |
| A [ | 279 | 297 | 302 | 316 | 313 | 293 | 228 | 34 | 822 | 903 | 37 | 75 | 800 | 349 | 307 | 280 | 291 | 279 | 289 | 294 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 253 | 242 | 245 | 239 | 226 | 216 | 266 | 877 | 77 | 33 | 28 | 105 | 65 | 243 | 280 | 280 | 265 | 286 | 282 | 267 | ] |
| G [ | 187 | 199 | 195 | 191 | 207 | 206 | 224 | 30 | 48 | 21 | 17 | 37 | 84 | 174 | 189 | 206 | 199 | 192 | 183 | 188 | ] |
| T [ | 282 | 262 | 259 | 254 | 254 | 285 | 281 | 58 | 53 | 43 | 918 | 783 | 51 | 234 | 224 | 235 | 245 | 242 | 246 | 251 | ] |
Binding sites information
No Binding sites available for this model.
External links
| Matrix ID | Base ID | Version | Name | Species | Family | Class | Sequence logo |
|---|---|---|---|---|---|---|---|
| MA1903.1 | MA1903 | 1 | Nk-1 |
Ciona intestinalis
|
NK | Homeo domain factors |  |
| MA1903.2 | MA1903 | 2 | Nk-1 |
Ciona intestinalis
|
NK | Homeo domain factors |  |
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: