Detailed information of matrix profile UN0100.2

  1. Home
  2. Matrix > UN0100.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: PGTG_04827
Matrix ID: UN0100.2
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Fungi
Species: Puccinia graminis
Data Type: PBM
Validation:
Uniprot ID: E3K314  
Source: 31133749
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 235 977 10 1 83 193 ]
C [ 562 0 0 0 0 57 ]
G [ 96 20 988 997 915 647 ]
T [ 105 1 0 0 0 101 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0100.1 UN0100 1 PGTG_04827 Puccinia graminis
C2H2 zinc finger factors
UN0100.2 UN0100 2 PGTG_04827 Puccinia graminis
C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: