Detailed information of matrix profile UN0105.2

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Profile summary

Name: ceh-74
Matrix ID: UN0105.2
Class: Homeo domain factors
Family: HOX
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation:
Uniprot ID: Q23269  
Source: 31133749
Comment: Class and TF information is inferred from the human ortholog to ces-2, obtained from MARRVEL db.

Sequence logo

Frequency matrix

         
A [ 170 0 0 999 0 0 ]
C [ 75 93 0 0 0 0 ]
G [ 677 0 999 0 999 999 ]
T [ 75 906 0 0 0 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0105.1 UN0105 1 ceh-74 Caenorhabditis elegans
Homeo domain factors
UN0105.2 UN0105 2 ceh-74 Caenorhabditis elegans
HOX Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: