Detailed information of matrix profile UN0111.1

  1. Home
  2. Matrix > UN0111.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ATF6B
Matrix ID: UN0111.1
Class: Basic leucine zipper factors (bZIP)
Family: CREB-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q99941  
Source: 28473536
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 2932 8910 30 29 21938 25 26 0 245 54 524 21938 ]
C [ 3308 2722 248 113 136 21938 21 3 6 36 21938 1656 ]
G [ 11544 13028 137 21938 56 73 21938 135 21938 21938 94 8224 ]
T [ 4153 417 21938 287 4 31 16 21938 217 4407 365 1982 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0110.1 UN0110 1 ATF6B Homo sapiens
CREB-related factors Basic leucine zipper factors (bZIP)
UN0111.1 UN0111 1 ATF6B Homo sapiens
CREB-related factors Basic leucine zipper factors (bZIP)
UN0112.1 UN0112 1 ATF6B Homo sapiens
CREB-related factors Basic leucine zipper factors (bZIP)
UN0110.2 UN0110 2 ATF6B Homo sapiens
CREB-related factors Basic leucine zipper factors (bZIP)
UN0111.2 UN0111 2 ATF6B Homo sapiens
CREB-related factors Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: