Detailed information of matrix profile UN0243.2

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Profile summary

Name: ZSCAN1
Matrix ID: UN0243.2
Class: C2H2 zinc finger factors
Family: Other factors with up to three adjacent zinc fingers
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: Q8NBB4  
Source: 28473536
Comment: not supported by literature

Sequence logo

Frequency matrix

         
A [ 17333 5 56655 0 56650 264 23337 588 2292 1669 39723 46245 56567 38909 ]
C [ 56 56649 0 56660 25 55246 18479 56404 637 4509 11581 24548 190 10915 ]
G [ 39311 15 21 0 38 120 14194 121 3584 52300 6753 150 210 9726 ]
T [ 0 34 0 0 4 2829 662 291 55173 7052 10043 688 109 6962 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0243.1 UN0243 1 ZSCAN1 Homo sapiens
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
UN0243.2 UN0243 2 ZSCAN1 Homo sapiens
Other factors with up to three adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: