Detailed information of matrix profile UN0401.2

  1. Home
  2. Matrix > UN0401.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: HMGB9
Matrix ID: UN0401.2
Class: ARID
Family:
Collection: UNVALIDATED
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation:
Uniprot ID: Q9SGS2  
Source: 27203113
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 1000 308 0 0 1000 1000 0 ]
C [ 0 0 0 0 0 0 0 ]
G [ 0 0 0 0 0 0 0 ]
T [ 0 692 1000 1000 0 0 1000 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0401.1 UN0401 1 HMGB9 Arabidopsis thaliana
ARID
UN0401.2 UN0401 2 HMGB9 Arabidopsis thaliana
ARID
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: