Detailed information of matrix profile UN0426.2

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Profile summary

Name: TAGL1
Matrix ID: UN0426.2
Class: MADS box factors
Family: Type II
Collection: UNVALIDATED
Taxon: Plants
Species: Solanum lycopersicum
Data Type:
Validation:
Uniprot ID: E9JUM2  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 2930 1091 4576 4641 4647 4590 4562 320 461 ]
C [ 676 351 61 47 23 14 37 46 83 ]
G [ 401 2722 106 85 83 109 85 4328 4129 ]
T [ 844 687 108 78 98 138 167 157 178 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0426.1 UN0426 1 TAGL1 Solanum lycopersicum
MIKC MADS box factors
UN0426.2 UN0426 2 TAGL1 Solanum lycopersicum
Type II MADS box factors
     

-log(P-value) = 2.49e-05

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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