Detailed information of matrix profile UN0450.1

  1. Home
  2. Matrix > UN0450.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ESRR
Matrix ID: UN0450.1
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID:  
Source: 31267468
Comment: No UniProt ID found.

Sequence logo

Frequency matrix

         
A [ 121 173 569 294 205 114 158 883 968 12 11 46 11 850 308 232 235 154 470 706 ]
C [ 154 514 128 200 277 280 580 13 12 12 10 18 903 31 211 221 224 474 277 33 ]
G [ 107 147 190 173 227 93 225 91 11 952 969 44 26 100 65 304 128 203 218 52 ]
T [ 618 166 113 333 291 513 38 12 9 24 10 892 61 20 416 243 413 170 35 208 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0450.1 UN0450 1 ESRR Ciona intestinalis
Steroid hormone receptors (NR3) Nuclear receptors with C4 zinc fingers
UN0450.2 UN0450 2 ESRR Ciona intestinalis
Steroid hormone receptors (NR3) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: