Detailed information of matrix profile UN0467.1

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Profile summary

Name: Prox-a
Matrix ID: UN0467.1
Class: Homeo domain factors
Family: HD-PROS factors
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2W9  
Source: 31267468
Comment:

Sequence logo

Frequency matrix

         
A [ 232 285 306 316 341 280 251 37 7 8 6 708 841 234 470 273 260 200 215 225 ]
C [ 227 218 216 179 170 367 100 86 969 18 86 61 42 86 100 285 158 264 264 263 ]
G [ 266 259 257 297 320 103 432 16 10 12 9 212 85 619 299 204 296 219 214 225 ]
T [ 275 238 221 207 170 251 217 861 14 961 898 19 31 61 130 238 286 318 307 287 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0467.1 UN0467 1 Prox-a Ciona intestinalis
HD-PROS factors Homeo domain factors
UN0467.2 UN0467 2 Prox-a Ciona intestinalis
HD-PROS factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: