Detailed information of matrix profile UN0479.2

  1. Home
  2. Matrix > UN0479.2
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: ZF-C2H2-35
Matrix ID: UN0479.2
Class: C2H2 zinc finger factors
Family:
Collection: UNVALIDATED
Taxon: Urochordates
Species: Ciona intestinalis
Data Type: SELEX
Validation:
Uniprot ID: Q4H2H4  
Source: 31267468
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 786 756 91 9 7 83 121 231 36 218 9 107 922 ]
C [ 64 83 676 977 7 846 25 95 94 178 956 822 14 ]
G [ 64 62 70 6 11 54 734 525 88 46 18 33 35 ]
T [ 86 99 162 8 975 17 120 150 782 558 17 37 30 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0479.1 UN0479 1 ZF-C2H2-35 Ciona intestinalis
C2H2 zinc finger factors
UN0479.2 UN0479 2 ZF-C2H2-35 Ciona intestinalis
C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: