Detailed information of matrix profile UN0487.1

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Profile summary

Name: CUX1::HOXB13
Matrix ID: UN0487.1
Class: Homeo domain factors::Homeo domain factors
Family: HD-CUT::HOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P39880   Q92826  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 764 2677 65 0 932 2677 84 871 129 246 550 2677 37 605 1467 107 ]
C [ 196 0 85 2677 0 0 0 145 85 13 173 35 1296 88 102 989 ]
G [ 1326 184 35 8 1745 0 0 891 101 106 36 52 33 1518 1209 1688 ]
T [ 390 157 2677 7 18 0 2677 771 2677 2677 2677 0 1380 1159 169 476 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0487.1 UN0487 1 CUX1::HOXB13 Homo sapiens
HD-CUT::HOX Homeo domain factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: