Detailed information of matrix profile UN0487.1

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Profile summary

Name: CUX1::HOXB13
Matrix ID: UN0487.1
Class: Homeo domain factors::Homeo domain factors
Family: HD-CUT::HOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: P39880   Q92826  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 476 169 1159 1380 0 2677 2677 2677 771 2677 0 18 7 2677 157 390 ]
C [ 1688 1209 1518 33 52 36 106 101 891 0 0 1745 8 35 184 1326 ]
G [ 989 102 88 1296 35 173 13 85 145 0 0 0 2677 85 0 196 ]
T [ 107 1467 605 37 2677 550 246 129 871 84 2677 932 0 65 2677 764 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0487.1 UN0487 1 CUX1::HOXB13 Homo sapiens
HD-CUT::HOX Homeo domain factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: