Detailed information of matrix profile UN0493.1

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Profile summary

Name: E2F3::ONECUT2
Matrix ID: UN0493.1
Class: Fork head/winged helix factors::Homeo domain factors
Family: E2F::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O00716   O95948  
Source: 26550823
Comment: TF has several motif variants.

Sequence logo

Frequency matrix

         
A [ 670 556 238 59 25 18 4 136 709 742 563 245 1903 232 31 26 1903 113 211 ]
C [ 248 149 822 17 1903 59 1903 937 496 164 132 141 0 17 1903 0 15 744 701 ]
G [ 315 591 1081 1903 37 1903 122 966 160 267 126 96 0 0 121 1903 11 130 314 ]
T [ 670 608 275 0 33 0 10 177 539 730 1082 1421 109 1903 595 2 0 1159 678 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0492.1 UN0492 1 E2F3::ONECUT2 Homo sapiens
E2F::HD-CUT Fork head/winged helix factors::Homeo domain factors
UN0493.1 UN0493 1 E2F3::ONECUT2 Homo sapiens
E2F::HD-CUT Fork head/winged helix factors::Homeo domain factors
UN0492.2 UN0492 2 E2F3::ONECUT2 Homo sapiens
E2F::HD-CUT Fork head/winged helix factors::Homeo domain factors
UN0493.2 UN0493 2 E2F3::ONECUT2 Homo sapiens
E2F::HD-CUT Fork head/winged helix factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: