Detailed information of matrix profile UN0520.1

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Profile summary

Name: ETV2::SPDEF
Matrix ID: UN0520.1
Class: Tryptophan cluster factors::Tryptophan cluster factors
Family: Ets-related::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O95238   Q3KNT2  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 18330 6305 6278 6693 14 12 20775 203 7911 7 41 2 50 34 42 28 33 972 2335 ]
C [ 3471 3924 10147 19505 9 12 24 12436 21 9 20783 20787 21 123 20783 20784 303 7770 7466 ]
G [ 5601 8289 10203 1057 20771 20774 13 208 5331 17 13 0 19079 179 42 14 19289 10910 5784 ]
T [ 8690 2269 152 23 19 23 3 17880 10270 20770 8 43 9418 20660 0 9 8698 5923 5202 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0520.1 UN0520 1 ETV2::SPDEF Homo sapiens
Ets-related::Ets-related Tryptophan cluster factors::Tryptophan cluster factors
UN0520.2 UN0520 2 ETV2::SPDEF Homo sapiens
Ets-related::Ets-related Tryptophan cluster factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: