Detailed information of matrix profile UN0520.1

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Profile summary

Name: ETV2::SPDEF
Matrix ID: UN0520.1
Class: Tryptophan cluster factors::Tryptophan cluster factors
Family: Ets-related::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation:
Uniprot ID: O95238   Q3KNT2  
Source: 26550823
Comment:

Sequence logo

Frequency matrix

         
A [ 5202 5923 8698 9 0 20660 9418 43 8 20770 10270 17880 3 23 19 23 152 2269 8690 ]
C [ 5784 10910 19289 14 42 179 19079 0 13 17 5331 208 13 20774 20771 1057 10203 8289 5601 ]
G [ 7466 7770 303 20784 20783 123 21 20787 20783 9 21 12436 24 12 9 19505 10147 3924 3471 ]
T [ 2335 972 33 28 42 34 50 2 41 7 7911 203 20775 12 14 6693 6278 6305 18330 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0520.1 UN0520 1 ETV2::SPDEF Homo sapiens
Ets-related::Ets-related Tryptophan cluster factors::Tryptophan cluster factors
UN0520.2 UN0520 2 ETV2::SPDEF Homo sapiens
Ets-related::Ets-related Tryptophan cluster factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: