Detailed information of matrix profile MA0005.2

Profile summary

Name: AG
Matrix ID: MA0005.2
Class: MADS box factors
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 7901838
Uniprot ID: P17839  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source:
Comment:

Sequence logo

Frequency matrix

A [ 21 9 10 29 0 0 31 47 52 25 17 19 7 2 22 45 40 15 ]
C [ 20 3 0 8 66 65 3 2 0 0 15 8 0 0 17 4 6 10 ]
G [ 6 3 1 8 0 0 6 0 1 1 11 20 57 54 5 5 9 16 ]
T [ 19 51 55 21 0 1 26 17 13 40 23 19 2 10 22 12 11 25 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.

External links