Detailed information of matrix profile MA0139.1

Profile summary

Name: CTCF
Matrix ID: MA0139.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc finger factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 17512414
Uniprot ID: P49711  
Pazar TF: TF0000607
TFBSshape ID: 133
TFencyclopedia IDs:
Source:
Comment: -

Sequence logo

Frequency matrix

A [ 87 167 281 56 8 744 40 107 851 5 333 54 12 56 104 372 82 117 402 ]
C [ 291 145 49 800 903 13 528 433 11 0 3 12 0 8 733 13 482 322 181 ]
G [ 76 414 449 21 0 65 334 48 32 903 566 504 890 775 5 507 307 73 266 ]
T [ 459 187 134 36 2 91 11 324 18 3 9 341 8 71 67 17 37 396 59 ]

Binding sites information

TFBS profiles