Detailed information of matrix profile MA0143.1

Profile summary

Name: Sox2
Matrix ID: MA0143.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 18555785
Uniprot ID: P48432  
Pazar TF: TF0000779
TFBSshape ID:
TFencyclopedia IDs: 531
Source:
Comment: -

Sequence logo

Frequency matrix

A [ 27 20 327 2 14 38 85 64 408 26 27 32 426 366 485 ]
C [ 444 453 7 10 1 83 4 194 124 39 77 422 41 67 60 ]
G [ 89 22 4 7 6 529 9 77 38 26 444 84 36 157 61 ]
T [ 107 174 331 650 648 19 570 333 96 575 117 127 161 74 58 ]

Binding sites information

TFBS profiles

No TFBSshape profile for this model.