Detailed information of matrix profile MA0508.4

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Profile summary
Name: PRDM1
Matrix ID: MA0508.4
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 28473536
Uniprot ID: O75626  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 660 49466 432 52619 50943 52905 829 ]
C [ 290 1390 207 561 1011 826 701 ]
G [ 52821 1076 53465 488 1346 467 52752 ]
T [ 1710 3549 1377 1813 2181 1283 1199 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0508.1 MA0508 1 PRDM1 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0508.2 MA0508 2 PRDM1 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0508.3 MA0508 3 PRDM1 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0508.4 MA0508 4 PRDM1 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: