Detailed information of matrix profile MA0508.4

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Profile summary
Name: PRDM1
Matrix ID: MA0508.4
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 28473536
Uniprot ID: O75626  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1199 1283 2181 1813 1377 3549 1710 ]
C [ 52752 467 1346 488 53465 1076 52821 ]
G [ 701 826 1011 561 207 1390 290 ]
T [ 829 52905 50943 52619 432 49466 660 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0508.1 MA0508 1 PRDM1 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0508.2 MA0508 2 PRDM1 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0508.3 MA0508 3 PRDM1 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0508.4 MA0508 4 PRDM1 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: