Detailed information of matrix profile MA0514.2

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Profile summary
Name: Sox3
Matrix ID: MA0514.2
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 8625802
Uniprot ID: P53784  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 2726 2213 973 187 11151 69 289 525 89 2159 2921 ]
C [ 2910 2915 7664 10041 104 143 93 178 76 2950 3478 ]
G [ 2887 3407 1582 133 150 143 312 11125 52 2777 1834 ]
T [ 3455 3443 1759 1617 573 11623 11284 150 11761 4092 3745 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0514.1 MA0514 1 Sox3 Mus musculus
SOX-related factors High-mobility group (HMG) domain factors
MA0514.2 MA0514 2 Sox3 Mus musculus
SOX-related factors High-mobility group (HMG) domain factors
MA0514.3 MA0514 3 Sox3 Mus musculus
SOX-related factors High-mobility group (HMG) domain factors
     

-log(P-value) = 1126.67

TFFM details

TFFM ID: TFFM0734.1

ChIP-seq Centrality
-log(P-value): 2780.95

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0734.1

ChIP-seq Centrality
-log(P-value): 2697.03

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: