Detailed information of matrix profile MA0547.2

Profile summary

Name: skn-1
Matrix ID: MA0547.2
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 23555279
Uniprot ID: P34707  
Source:
Comment: Class and TF information is inferred from the human ortholog to skn-1, obtained from Wormbase.

Sequence logo

Frequency matrix

A [ 190 237 209 268 32 0 265 20 0 318 31 249 240 139 ]
C [ 43 12 24 0 36 17 35 0 0 0 179 0 0 16 ]
G [ 62 39 55 16 26 301 5 0 318 0 22 28 0 21 ]
T [ 23 30 30 34 224 0 13 298 0 0 86 41 78 142 ]

Binding sites information

External links