Detailed information of matrix profile MA0560.2

  1. Home
  2. Matrix > MA0560.2

Profile summary
Name: PIF3
Matrix ID: MA0560.2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-seq
Validation: 10797009
Uniprot ID: O80536  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 19 0 527 0 0 0 0 ]
C [ 399 527 0 409 0 0 0 ]
G [ 94 0 0 0 527 0 527 ]
T [ 15 0 0 118 0 527 0 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0560.1 MA0560 1 PIF3 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
MA0560.2 MA0560 2 PIF3 Arabidopsis thaliana
bHLH Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: