Detailed information of matrix profile MA0570.3

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Profile summary
Name: ABF1
Matrix ID: MA0570.3
Class: Basic leucine zipper factors (bZIP)
Family: Group A
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: ChIP-seq
Validation: 10636868
Uniprot ID: Q9M7Q5  
Source: 30445619
Comment:

Sequence logo

Frequency matrix

         
A [ 593 83 1123 10 16 4 9 39 81 909 ]
C [ 284 793 4 1099 9 8 3 11 999 36 ]
G [ 60 124 11 15 1107 1 1123 707 28 117 ]
T [ 204 141 3 17 9 1128 6 384 33 79 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0570.1 MA0570 1 ABF1 Arabidopsis thaliana
Group A Basic leucine zipper factors (bZIP)
MA0570.2 MA0570 2 ABF1 Arabidopsis thaliana
Group A Basic leucine zipper factors (bZIP)
MA0570.3 MA0570 3 ABF1 Arabidopsis thaliana
Group A Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: