Detailed information of matrix profile MA0869.2

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Profile summary
Name: Sox11
Matrix ID: MA0869.2
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 24681958 12920151
Uniprot ID: Q7M6Y2  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 2884 4163 1014 7912 9856 119 10020 9676 9276 506 3244 3542 ]
C [ 2447 974 764 766 100 9471 108 264 61 148 2321 2800 ]
G [ 3058 3112 8063 1298 211 501 49 248 233 9486 3936 2627 ]
T [ 1859 1999 407 272 81 157 71 60 678 108 747 1279 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0869.1 MA0869 1 Sox11 Mus musculus
SOX-related factors High-mobility group (HMG) domain factors
MA0869.2 MA0869 2 Sox11 Mus musculus
SOX-related factors High-mobility group (HMG) domain factors
MA0869.3 MA0869 3 Sox11 Mus musculus
SOX-related factors High-mobility group (HMG) domain factors
     

-log(P-value) = 1499.67

TFFM details

TFFM ID: TFFM0803.1

ChIP-seq Centrality
-log(P-value): 2337.36

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0803.1

ChIP-seq Centrality
-log(P-value): 2004.24

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: