Detailed information of matrix profile MA1055.3

  1. Home
  2. Matrix > MA1055.3

Profile summary
Name: SPL1
Matrix ID: MA1055.3
Class: C3H(C),C2HC zinc fingers factors
Family: SBP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: SELEX
Validation: 24477691 16554053
Uniprot ID: Q9SMX9  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 416 337 105 40 17 3576 54 2372 ]
C [ 77 3054 3382 11 10 19 3426 347 ]
G [ 216 45 50 3558 30 49 43 522 ]
T [ 2954 227 126 54 3606 19 140 422 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1055.1 MA1055 1 SPL1 Arabidopsis thaliana
SBP C2H2 zinc finger factors
MA1055.2 MA1055 2 SPL1 Arabidopsis thaliana
SBP
MA1055.3 MA1055 3 SPL1 Arabidopsis thaliana
SBP C3H(C),C2HC zinc fingers factors
     

-log(P-value) = 2664.07

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: