Detailed information of matrix profile MA1070.2

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Profile summary
Name: TGA7
Matrix ID: MA1070.2
Class: Basic leucine zipper factors (bZIP)
Family: Group D
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 8487298 8487298
Uniprot ID: Q93ZE2  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 659 453 367 982 7 7 1734 5 107 5 114 1709 65 358 658 ]
C [ 295 314 183 371 13 6 5 1651 3 7 1593 1 509 795 290 ]
G [ 313 289 909 352 3 1611 8 9 1646 4 41 39 402 208 321 ]
T [ 492 703 300 54 1736 135 12 94 3 1743 11 10 783 398 490 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1070.1 MA1070 1 TGA7 Arabidopsis thaliana
Group D Basic leucine zipper factors (bZIP)
MA1070.2 MA1070 2 TGA7 Arabidopsis thaliana
Group D Basic leucine zipper factors (bZIP)
MA1070.3 MA1070 3 TGA7 Arabidopsis thaliana
Group D Basic leucine zipper factors (bZIP)
     

-log(P-value) = 2263.5

TFFM details

TFFM ID: TFFM0820.1

ChIP-seq Centrality
-log(P-value): 2768.57

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0820.1

ChIP-seq Centrality
-log(P-value): 2763.02

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: