Detailed information of matrix profile MA1070.2

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Profile summary
Name: TGA7
Matrix ID: MA1070.2
Class: Basic leucine zipper factors (bZIP)
Family: Group D
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 8487298 8487298
Uniprot ID: Q93ZE2  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 490 398 783 10 11 1743 3 94 12 135 1736 54 300 703 492 ]
C [ 321 208 402 39 41 4 1646 9 8 1611 3 352 909 289 313 ]
G [ 290 795 509 1 1593 7 3 1651 5 6 13 371 183 314 295 ]
T [ 658 358 65 1709 114 5 107 5 1734 7 7 982 367 453 659 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1070.1 MA1070 1 TGA7 Arabidopsis thaliana
Group D Basic leucine zipper factors (bZIP)
MA1070.2 MA1070 2 TGA7 Arabidopsis thaliana
Group D Basic leucine zipper factors (bZIP)
MA1070.3 MA1070 3 TGA7 Arabidopsis thaliana
Group D Basic leucine zipper factors (bZIP)
     

-log(P-value) = 2263.5

TFFM details

TFFM ID: TFFM0820.1

ChIP-seq Centrality
-log(P-value): 2768.57

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0820.1

ChIP-seq Centrality
-log(P-value): 2763.02

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: