Detailed information of matrix profile MA1079.2

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Profile summary
Name: WRKY21
Matrix ID: MA1079.2
Class: GCM domain factors
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 11449049 11449049
Uniprot ID: O04336  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 79 77 87 137 198 203 220 2 0 0 237 239 28 33 66 71 86 89 80 80 ]
C [ 51 34 58 42 8 3 1 0 0 238 0 0 197 16 82 71 37 35 40 44 ]
G [ 44 54 33 24 17 12 11 236 0 0 1 0 0 153 42 28 43 42 46 49 ]
T [ 65 74 61 36 16 21 7 1 239 1 1 0 14 37 49 69 73 73 73 66 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1079.1 MA1079 1 WRKY21 Arabidopsis thaliana
WRKY GCM domain factors
MA1079.2 MA1079 2 WRKY21 Arabidopsis thaliana
WRKY GCM domain factors
MA1079.3 MA1079 3 WRKY21 Arabidopsis thaliana
WRKY GCM domain factors
     

-log(P-value) = 215.948

TFFM details

TFFM ID: TFFM0821.1

ChIP-seq Centrality
-log(P-value): 229.787

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0821.1

ChIP-seq Centrality
-log(P-value): 214.96

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: