Detailed information of matrix profile MA1079.2

  1. Home
  2. Matrix > MA1079.2

Profile summary
Name: WRKY21
Matrix ID: MA1079.2
Class: GCM domain factors
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 11449049 11449049
Uniprot ID: O04336  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 66 73 73 73 69 49 37 14 0 1 1 239 1 7 21 16 36 61 74 65 ]
C [ 49 46 42 43 28 42 153 0 0 1 0 0 236 11 12 17 24 33 54 44 ]
G [ 44 40 35 37 71 82 16 197 0 0 238 0 0 1 3 8 42 58 34 51 ]
T [ 80 80 89 86 71 66 33 28 239 237 0 0 2 220 203 198 137 87 77 79 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1079.1 MA1079 1 WRKY21 Arabidopsis thaliana
WRKY GCM domain factors
MA1079.2 MA1079 2 WRKY21 Arabidopsis thaliana
WRKY GCM domain factors
MA1079.3 MA1079 3 WRKY21 Arabidopsis thaliana
WRKY GCM domain factors
     

-log(P-value) = 215.948

TFFM details

TFFM ID: TFFM0821.1

ChIP-seq Centrality
-log(P-value): 229.787

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0821.1

ChIP-seq Centrality
-log(P-value): 214.96

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: