Detailed information of matrix profile MA1081.2

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Profile summary
Name: WRKY25
Matrix ID: MA1081.2
Class: GCM domain factors
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 11449049 11449049
Uniprot ID: O22921  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 380 462 333 99 78 9 5 3 1218 10 29 590 460 351 354 377 ]
C [ 254 181 320 927 18 13 4 4 0 1202 731 131 129 218 210 277 ]
G [ 212 259 227 53 1002 5 4 1217 7 7 24 179 212 236 248 181 ]
T [ 382 326 348 149 130 1201 1215 4 3 9 444 328 427 423 416 393 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1081.1 MA1081 1 WRKY25 Arabidopsis thaliana
WRKY GCM domain factors
MA1081.2 MA1081 2 WRKY25 Arabidopsis thaliana
WRKY GCM domain factors
MA1081.3 MA1081 3 WRKY25 Arabidopsis thaliana
WRKY GCM domain factors
     

-log(P-value) = 1405.57

TFFM details

TFFM ID: TFFM0822.1

ChIP-seq Centrality
-log(P-value): 1021.71

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0822.1

ChIP-seq Centrality
-log(P-value): 1029.3

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: