Detailed information of matrix profile MA1081.2

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Profile summary
Name: WRKY25
Matrix ID: MA1081.2
Class: GCM domain factors
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 11449049 11449049
Uniprot ID: O22921  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 393 416 423 427 328 444 9 3 4 1215 1201 130 149 348 326 382 ]
C [ 181 248 236 212 179 24 7 7 1217 4 5 1002 53 227 259 212 ]
G [ 277 210 218 129 131 731 1202 0 4 4 13 18 927 320 181 254 ]
T [ 377 354 351 460 590 29 10 1218 3 5 9 78 99 333 462 380 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1081.1 MA1081 1 WRKY25 Arabidopsis thaliana
WRKY GCM domain factors
MA1081.2 MA1081 2 WRKY25 Arabidopsis thaliana
WRKY GCM domain factors
MA1081.3 MA1081 3 WRKY25 Arabidopsis thaliana
WRKY GCM domain factors
     

-log(P-value) = 1405.57

TFFM details

TFFM ID: TFFM0822.1

ChIP-seq Centrality
-log(P-value): 1021.71

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0822.1

ChIP-seq Centrality
-log(P-value): 1029.3

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: