Detailed information of matrix profile MA1083.2

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Profile summary
Name: WRKY30
Matrix ID: MA1083.2
Class: GCM domain factors
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 11449049
Uniprot ID: Q9FL62  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 794 807 948 508 261 92 14 16 6 2537 19 74 534 585 ]
C [ 497 579 316 481 1992 19 8 5 6 3 2498 885 366 432 ]
G [ 440 437 659 1009 176 2387 11 9 2526 7 11 65 269 507 ]
T [ 823 731 631 556 125 56 2521 2524 16 7 26 1530 1385 1030 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1083.1 MA1083 1 WRKY30 Arabidopsis thaliana
WRKY GCM domain factors
MA1083.2 MA1083 2 WRKY30 Arabidopsis thaliana
WRKY GCM domain factors
MA1083.3 MA1083 3 WRKY30 Arabidopsis thaliana
WRKY GCM domain factors
     

-log(P-value) = 4280.8

TFFM details

TFFM ID: TFFM0823.1

ChIP-seq Centrality
-log(P-value): 3918.24

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0823.1

ChIP-seq Centrality
-log(P-value): 3875.2

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: