Detailed information of matrix profile MA1083.2

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Profile summary
Name: WRKY30
Matrix ID: MA1083.2
Class: GCM domain factors
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 11449049
Uniprot ID: Q9FL62  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1030 1385 1530 26 7 16 2524 2521 56 125 556 631 731 823 ]
C [ 507 269 65 11 7 2526 9 11 2387 176 1009 659 437 440 ]
G [ 432 366 885 2498 3 6 5 8 19 1992 481 316 579 497 ]
T [ 585 534 74 19 2537 6 16 14 92 261 508 948 807 794 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1083.1 MA1083 1 WRKY30 Arabidopsis thaliana
WRKY GCM domain factors
MA1083.2 MA1083 2 WRKY30 Arabidopsis thaliana
WRKY GCM domain factors
MA1083.3 MA1083 3 WRKY30 Arabidopsis thaliana
WRKY GCM domain factors
     

-log(P-value) = 4280.8

TFFM details

TFFM ID: TFFM0823.1

ChIP-seq Centrality
-log(P-value): 3918.24

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0823.1

ChIP-seq Centrality
-log(P-value): 3875.2

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: