Detailed information of matrix profile MA1087.2

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Profile summary
Name: WRKY45
Matrix ID: MA1087.2
Class: GCM domain factors
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 11449049
Uniprot ID: Q9S763  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 739 878 1345 1914 1960 2087 16 4 12 2160 2155 721 586 708 684 ]
C [ 377 445 339 75 34 16 3 5 2166 16 8 1211 297 485 451 ]
G [ 475 339 218 85 51 59 2159 7 6 2 15 56 936 424 314 ]
T [ 603 532 292 120 149 32 16 2178 10 16 16 206 375 577 745 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1087.1 MA1087 1 WRKY45 Arabidopsis thaliana
WRKY GCM domain factors
MA1087.2 MA1087 2 WRKY45 Arabidopsis thaliana
WRKY GCM domain factors
MA1087.3 MA1087 3 WRKY45 Arabidopsis thaliana
WRKY GCM domain factors
     

-log(P-value) = 2156.95

TFFM details

TFFM ID: TFFM0824.1

ChIP-seq Centrality
-log(P-value): 1849.91

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0824.1

ChIP-seq Centrality
-log(P-value): 1850.63

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: